Collections Used in the Concept Navigator v. 2 

Version 2 of our prototype software navigates concepts from collections of biomedical journal abstracts and from the entire Medline archive (around 13 million entries). The biomedical journal collections we use result from the following BIOSIS search queries:

Organism
-- Honey Bee
Query:    honeybee? or (honey bee?) or (apis mellifera)  
Results:  9727 records returned
-- Fruit Fly:  Fly Ecology, Evolution and Behavior
((evolution in TS) or (ecology in TS) or (behavior in TS)) and (fruit fly or drosophila)
9173 records
-- Flour Beetle
tribolium or "flour beetle"
2752 records
-- Song Bird:  Bird Communication
(aves in ST) and (communication in MC)
4785 records
-- Soy Bean: Soy Bean response to environmental conditions
(dicots in TN) and (carbon dioxide)
8291 records
-- Cereal Genetics: Genomes of the Grasses (Crop Plants)
(Gramineae in TA) and (Plant Genetics in CC) and (Molecular Genetics in MC)
12610 records

Behavior
-- Social: Behavior of Social Integration in Insects
(socia* or gregarious or nurs*) and ((behavior in TS) or (ecology in TS) or (evolution in TS)) and (insect* in TS)     
6477
-- Foraging: Behavior of Resource Acquisition
forag* and (behavior in TS) and (insect* in TS)
5959
-- Nesting:  Home Maintenance and Defense
(hive* and (insect* in TS)) or (nest* and (rodent* in TS))
6342
-- Territorial: Agonistic and Territorial Behaviors
(agonis* or territorial or fight* or competition or conflict*  or attack*) and (behavior in TS) and (insect* in TS)     
6202

Development
-- Behaviorial  Maturation
(maturation or alteration) and (behavior in TS)
6733
-- Insect Development
(development in MC) and (insect* in TS) and (PY >= 1995)
16567
-- Insect Communication
(communication in MC) and (insect* in TS)
9622

Structure
-- Fly Genetics
(genetics in TS) and (fruit fly or drosophila) and (PY >= 1995)
16577
-- Fly Biochemistry
((biochemistry or cell biology) in TS) and (fruit fly or drosophila) and (PY >= 1995)   
19811
-- Fly Physiology
(physiology in TS) and (fruit fly or drosophila) and (PY >= 1995)
4724
-- Insect Neurophysiology
(sensory or neural) and (insect* in TS) and (PY >= 1995)      
10905

Books
-- Honey Bee Books
This collection consists of the full texts of ten rare 19th-century books digitized by Cornell University for its E. F. Phillips Beekeeping Collection.

User Collections from queries across PubMed
-- Bee Communication
Apis "acoustic signal" cerana dorsata florea "johnston organ" laboriosa melipona mellifera "stingless bee" vibration vibratory
23302
-- Circadian Rhythm
arrestin "circadian cycle" "circadian rhythm" "clock gene" entrainment opsin pacemaker "pattern generator" pdf pdh pretraine
81998
-- FlyBase Bibliography
official records for FlyBase curators to cite
36300